# 24.11.06 earth science: biogeochemical cycles

- Bio-geo-chemical cycles: bio=life, geo=earth, chemical=chemical
- These are cycles as the go from some reservoir through the environment and back
- These are known as sources and sinks
- Often the reservoir will be the key to identifying the cycle

### <span style="font-weight: bold;">Carbon cycle: air and living things</span>

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Notice:

- fast processes involve living things (you eat sugar, exhale <span style="font-weight: bold;">carbon</span> dioxide)
- slow processes involve minerals, rocks and soil, <span style="font-weight: bold;">hydrocarbons</span>, and the oceans
- photosynthesis: light energy creates chemical energy (e.g. sugar)
- respiration: oxygen combines with sugar or other <span style="font-weight: bold;">carbon</span> fuel, releasing carbon dioxide and energy
- chemosynthesis: same process only using heat instead of light, sulfur instead of oxygen (look on periodic table)
- aerobic respiration: uses oxygen
- anaerobic respiration: uses <span style="font-weight: bold;">carbon</span> based fuels without oxygen, much less efficient
- <span style="font-weight: bold;">carbon</span> stored in the ocean as carbonate (H2CO3 or carbonic acid)
- <span style="font-weight: bold;">carbon</span> stored in corals as CaCO3 (calcium carbonate)
- <span style="font-weight: bold;">carbon</span> sediments can turn into fossil fuels (coal, oil, natural gas) with time, heat and pressure
- steady state: sources and sinks are equal
- fossil fuel extraction: combines with oxygen to form <span style="font-weight: bold;">carbon</span> dioxide and energy (reverse of photosynthesis)
- released <span style="font-weight: bold;">CO2</span> increases the heating of the earth:

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This has caused the planet to warm like a greenhouse, since fossil fuels were used as fuel (coal, then oil and natural gas):<div class="sandbox" id="bkmrk-unavailable-apple-wi-6"><div id="bkmrk-unavailable-apple-wi-7"><div id="bkmrk-unavailable-apple-wi-8"><div><div class="container"><div class="frontside"><div class="iframe">**Unavailable Apple Wiki media:** the exported data did not include file 7770b7d7-b17c-454c-a700-b1f19621b9dd.

</div></div></div></div></div></div></div><div id="bkmrk-how-fast-is-this-cha"><span style="font-weight: bold;">How fast is this changing?:</span></div><div id="bkmrk-in-1990%2C-the-co2-par">In 1990, the CO2 parts per million was increasing 0.4 ppm/year</div><div id="bkmrk-in-2025%2C-it-is-incre">In 2025, it is increasing 2.5 ppm per year</div><div id="bkmrk-54%25-of-the-co2-in-th">54% of the CO2 in the atmosphere has been added since ~1975</div><div id="bkmrk-omg...">OMG...</div><div id="bkmrk-a-global-temp-increa">A global temp increase of +1.5° by the year 2100 when you are ~80 years old WAS the warming target in 2000 </div><div id="bkmrk-%2B2%C2%B0-was-the-next-one">+2° was the next one in 2010...</div><div id="bkmrk-latest-predictions-i">Latest predictions in 2025: +3° C and perhaps several meters of water rise</div><div id="bkmrk-last-time-the-co2-wa">Last time the CO2 was this high: prehistoric water levels were 300m higher (Kamuela is at 800m).</div>### <span style="font-weight: bold;">Nitrogen cycle: proteins</span>

- <span style="font-weight: bold;">Nitrogen</span> is in the air as N2, a diatomic molecule
- We can't metabolize this as is, it needs to be incorporated into plants or animals we eat.
- Plants cannot use <span style="font-weight: bold;">nitrogen</span> directly from the atmosphere, it has be in the form of nitrates ("plants ate nitrate")
- <span style="font-weight: bold;">Nitrogen</span> goes through many changes to get from the air to food, usually involving oxygen, like nitrates (NO3)
- <span style="font-weight: bold;">Nitrogen</span> fixation "fixes" nitrogen in the air into forms plants can use, either biotically (living things) or abiotically (not living things)
- <span style="font-weight: bold;">Nitrogen</span> is the basis for amino acids, and therefore proteins in living thing

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</div></div></div></div></div></div></div><span id="bkmrk-biotic-process%3A-nitr" style="font-weight: bold;">Biotic process: Nitrogen fixing, most common</span><div id="bkmrk-nitrogen-fixing-bact">

1. <span style="font-weight: bold;">nitrogen</span> fixing bacteria (often along roots like in bean plants) fix <span style="font-weight: bold;">nitrogen</span> gas (N2) into ammonia (NH3)
2. this is converted into <span style="font-weight: bold;">ammonium (NH4)</span> which plants can use

<div><span style="font-weight: bold;">Abiotic (non living) process:</span></div></div><div id="bkmrk-lightning-or-fires-h">

1. lightning or fires have enough energy to combine N2 with O2, making NO3
2. NO3 is carried to the ground with rain (the rain smell)
3. can also be done using the Haber process for chemical nitrate synthesis

<div><span style="font-weight: bold;">Next step: Nitrification</span></div></div><div id="bkmrk-ammonium-needs-to-be">Ammonium needs to be converted to Nitrate for plants ("plants ate nitrate")</div><div id="bkmrk-ammonium-%28nh4%29-conve">

1. Ammonium (NH4) converts to nitrite (NO2) (look up sodium nitrite and what is is used for)
2. NO2 converts to NO3 (nitrate) (plants can use this)
3. commercial fertilizers are something with NO3, like NH4NO3, ammonium nitrate (a potent explosive: [Beirut port explosion](https://www.youtube.com/watch?v=FnSr820S2Mk))

<div>Ammonification is when dead organisms return this NH4 back into the ecosystem through denitrification:</div></div><div id="bkmrk-no3--%3En2o-%3En2-gas">NO3 -&gt;N2O-&gt;N2 gas</div><div id="bkmrk--6">  
</div><div id="bkmrk-summary%3A"><span style="font-weight: bold;">Summary:</span></div><div id="bkmrk--7">  
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1. N2 gas in the air fixed by organisms into ammonia (NH3)
2. Ammonia (NH3)converts into ammonium (NH4)
3. ammonium (NH4) converts into nitrite (NO2)
4. Nitrite (NO2) converts to nitrate (NO3)

<div>so:</div><div>N2-&gt;NH3-&gt;HN4-&gt;NO2-NO3 (nitrate)</div><div><span style="font-weight: bold;">remember: plants ate nitrate</span></div></div><div class="sandbox" id="bkmrk-unavailable-apple-wi-12"><div id="bkmrk-unavailable-apple-wi-13"><div id="bkmrk-unavailable-apple-wi-14"><div><div class="container"><div class="frontside"><div class="iframe">**Unavailable Apple Wiki media:** the exported data did not include file 761b1031-43d1-481b-9547-3037f311c882.

</div></div></div></div></div></div></div><div id="bkmrk-nitrogen-is-a-limiti">Nitrogen is a limiting growth nutrient in ecosystems, excess nitrogen can cause algal blooms:</div><div id="bkmrk-nitrogen-causes-alga">

1. Nitrogen causes algae to bloom
2. Algae dies, falling to the bottom of the water body
3. As it decays, it consumes the Oxygen from the water: dead zones

</div>### <span style="font-weight: bold;">Phosphorus cycle: energy</span>

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- Phosphorus is used as an energy molecule: AMP, ADP, ATP use P bonds to store energy (look these up)
- P is also a key component in DNA and RNA
- P is a limiting nutrient for plants, along with Nitrogen

<div>Phosphorus cycle:</div></div><div class="sandbox" id="bkmrk-unavailable-apple-wi-15"><div id="bkmrk-unavailable-apple-wi-16"><div id="bkmrk-unavailable-apple-wi-17"><div><div class="container"><div class="frontside"><div class="iframe">**Unavailable Apple Wiki media:** the exported data did not include file a7eae3aa-4c8d-4eaa-8219-47c3bec618a4.

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<span id="bkmrk-trick-ap-question%3A-w" style="font-weight: bold;">Trick AP question: which cycle has no gas phase component? </span><div id="bkmrk-answer%3A-phosphorus%2C-">Answer: Phosphorus, just between land and water</div><div id="bkmrk-p-is-carried-as-dust">  
P is carried as dust from the Sahara to the US, and from the Gobi desert to Kauai (!)  
Usually in the form of phosphate (PO4)  
5 processes: </div><div id="bkmrk-assimilationminerali">

1. assimilation
2. mineralization
3. sedimentation (like sedimentary rocks)
4. uplift
5. weathering (erosion)

<div>Very little P is found in rivers, so it is a limiting nutrient (eutrophication)</div></div><div id="bkmrk-algal-bloom%3A">Algal Bloom:</div><div class="sandbox" id="bkmrk-unavailable-apple-wi-18"><div id="bkmrk-unavailable-apple-wi-19"><div id="bkmrk-unavailable-apple-wi-20"><div><div class="container"><div class="frontside"><div class="iframe">**Unavailable Apple Wiki media:** the exported data did not include file 07ad3c4c-e68c-48bd-9a26-5f2aeb327fc6.

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Dead zone, from watershed:<div class="sandbox" id="bkmrk-unavailable-apple-wi-21"><div id="bkmrk-unavailable-apple-wi-22"><div id="bkmrk-unavailable-apple-wi-23"><div><div class="container"><div class="frontside"><div class="iframe">**Unavailable Apple Wiki media:** the exported data did not include file 94df6568-b113-4dc9-930b-28e80b0a08ea.

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### <span style="font-weight: bold;">Water (hydrologic) cycle: basis of life</span>

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- <span style="font-weight: bold;">Transpiration</span>: when water leaves plants through leaves (not the same as evaporation)
- <span style="font-weight: bold;">Evaporation</span>: when water changes from liquid to gas phase (vapor)
- <span style="font-weight: bold;">Condensation</span>: when vapor forms into drops (liquid)
- <span style="font-weight: bold;">Precipitation</span>: when water drops fall from the sky (rain)
- <span style="font-weight: bold;">Evapotranspiration:</span> a combination of sunlight, wind, humidity, temp, to increase transpiration from plants (known as EtO)
- <span style="font-weight: bold;">Runoff</span> is when water moves across land into other bodies of water
- <span style="font-weight: bold;">Percolation</span> is when it flows through soil, think of a coffee percolator (like in your soil lab)
- <span style="font-weight: bold;">Transit time:</span> the time between when rain falls on the surface until it enters a stream or river body (recall #2 on your homework)

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Note what drives this entire cycle is solar energy...  
<div id="bkmrk-games-to-try%3A">Games to try:</div><div id="bkmrk-https%3A%2F%2Fwww.classtoo">[https://www.classtools.net/vortex/202201-VCk3Yb](https://www.classtools.net/vortex/202201-VCk3Yb)  
</div><div id="bkmrk-https%3A%2F%2Fwordwall.net">[https://wordwall.net/resource/10488872/biology/eutrophication-mix-and-match](https://wordwall.net/resource/10488872/biology/eutrophication-mix-and-match)  
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